1R3W
Uroporphyrinogen Decarboxylase Y164F mutant in complex with coproporphyrinogen-III
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2003-06-15 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 103.035, 103.035, 73.646 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 87.710 - 1.700 |
R-factor | 0.1583 |
Rwork | 0.158 |
R-free | 0.18887 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 1uro |
RMSD bond length | 0.015 |
RMSD bond angle | 1.549 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 87.710 | 1.760 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.071 | 0.390 |
Number of reflections | 49087 | |
<I/σ(I)> | 12 | 1.8 |
Completeness [%] | 99.0 | 99 |
Redundancy | 5.9 | 5.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIQUID DIFFUSION | 6.5 | 294 | PBG, PBG-D and U3S were added to the protein solution in an anaerobic chamber. URO-D was active under these conditions, converting uro'gen-III to cop'gen-III. 1.5 M citrate, pH 6.5, LIQUID DIFFUSION, temperature 294K |