1R20
Crystal structure of the ligand-binding domains of the heterodimer EcR/USP bound to the synthetic agonist BYI06830
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-4 |
Synchrotron site | ESRF |
Beamline | ID14-4 |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2002-03-12 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.9393 |
Spacegroup name | P 3 2 1 |
Unit cell lengths | 149.429, 149.429, 61.058 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 15.000 - 3.000 |
R-factor | 0.244 |
Rwork | 0.244 |
R-free | 0.28900 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.020 |
RMSD bond angle | 21.100 * |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | EPMR |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 15.000 | 3.070 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.072 * | 0.355 * |
Total number of observations | 127854 * | |
Number of reflections | 15421 | |
Completeness [%] | 95.3 | 85.6 |
Redundancy | 8.3 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 * | 24 * | PEG 1000, PEG 8000, MgCl2, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
1 | VAPOR DIFFUSION, HANGING DROP | 8 * | 24 * | PEG 1000, PEG 8000, MgCl2, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | Tris | 25 (mM) | pH8.0 |
10 | 1 | reservoir | HEPES | 0.1 (M) | pH7.5 |
2 | 1 | drop | 100 (mM) | ||
3 | 1 | drop | 100 (mM) | ||
4 | 1 | drop | CHAPS | 4 (mM) | |
5 | 1 | drop | glycerol | 2 (%(v/v)) | |
6 | 1 | drop | protein | 4-6 (mg/ml) | |
7 | 1 | reservoir | PEG1000 | 10 (%) | |
8 | 1 | reservoir | PEG8000 | 10 (%) | |
9 | 1 | reservoir | 0.3 (M) |