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1QZ1

Crystal Structure of the Ig 1-2-3 fragment of NCAM

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsMAX II BEAMLINE I711
Synchrotron siteMAX II
BeamlineI711
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2000-11-06
DetectorMARRESEARCH
Wavelength(s)1.0526
Spacegroup nameI 21 21 21
Unit cell lengths51.440, 107.760, 149.300
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.640 - 2.000
Rwork0.218
R-free0.23800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1epf
RMSD bond length0.008
RMSD bond angle27.500

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.070
High resolution limit [Å]2.0002.000
Rmerge0.0390.209
Total number of observations164206

*

Number of reflections27881
<I/σ(I)>19.61.4
Completeness [%]99.299.4
Redundancy5.93.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.4

*

18

*

14-17% PEG 4000, 450 mM Li sulfate, 100 mM Na acetate, pH 5.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K
1VAPOR DIFFUSION, HANGING DROP7.4

*

18

*

14-17% PEG 4000, 450 mM Li sulfate, 100 mM Na acetate, pH 5.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein4 (mg/ml)
21dropsodium phosphate5 (mM)
31drop150 (mM)pH7.4
41reservoirPEG400014-17 (%(w/v))
51reservoirlithium sulfate450 (mM)
61reservoirsodium acetate100 (mM)pH5.2

220113

PDB entries from 2024-05-22

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