1QZ1
Crystal Structure of the Ig 1-2-3 fragment of NCAM
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | MAX II BEAMLINE I711 |
| Synchrotron site | MAX II |
| Beamline | I711 |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2000-11-06 |
| Detector | MARRESEARCH |
| Wavelength(s) | 1.0526 |
| Spacegroup name | I 21 21 21 |
| Unit cell lengths | 51.440, 107.760, 149.300 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 48.640 - 2.000 |
| Rwork | 0.218 |
| R-free | 0.23800 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1epf |
| RMSD bond length | 0.008 |
| RMSD bond angle | 27.500 * |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | AMoRE |
| Refinement software | CNS (1.0) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.070 |
| High resolution limit [Å] | 2.000 | 2.000 |
| Rmerge | 0.039 | 0.209 |
| Total number of observations | 164206 * | |
| Number of reflections | 27881 | |
| <I/σ(I)> | 19.6 | 1.4 |
| Completeness [%] | 99.2 | 99.4 |
| Redundancy | 5.9 | 3.8 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.4 * | 18 * | 14-17% PEG 4000, 450 mM Li sulfate, 100 mM Na acetate, pH 5.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.4 * | 18 * | 14-17% PEG 4000, 450 mM Li sulfate, 100 mM Na acetate, pH 5.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | protein | 4 (mg/ml) | |
| 2 | 1 | drop | sodium phosphate | 5 (mM) | |
| 3 | 1 | drop | 150 (mM) | pH7.4 | |
| 4 | 1 | reservoir | PEG4000 | 14-17 (%(w/v)) | |
| 5 | 1 | reservoir | lithium sulfate | 450 (mM) | |
| 6 | 1 | reservoir | sodium acetate | 100 (mM) | pH5.2 |






