1QM6
Closed form of Clostridium perfringens alpha-toxin strain NCTC8237
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SRS BEAMLINE PX7.2 |
| Synchrotron site | SRS |
| Beamline | PX7.2 |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 1998-06-15 |
| Detector | MARRESEARCH |
| Spacegroup name | H 3 2 |
| Unit cell lengths | 149.540, 149.540, 193.830 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 30.000 - 2.500 |
| R-factor | 0.22 |
| Rwork | 0.220 |
| R-free | 0.24700 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | CALCIUM-FREE CLOSED ALPHA-TOXIN STRAIN CER89L43 (PDB CODE: 1CA1) |
| RMSD bond length | 0.008 |
| RMSD bond angle | 23.270 * |
| Data reduction software | DENZO |
| Data scaling software | SCALA |
| Phasing software | CNS (0.5) |
| Refinement software | CNS (0.5) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 30.000 | 2.700 |
| High resolution limit [Å] | 2.600 | 2.600 |
| Rmerge | 0.121 | 0.336 |
| Total number of observations | 98122 * | |
| Number of reflections | 29145 | 3939 * |
| <I/σ(I)> | 8.8 | 4.2 |
| Completeness [%] | 90.5 | 87.9 |
| Redundancy | 3.9 | 3.6 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 4.7 | PROTEIN WAS CRYSTALLISED BY HANGING DROP FROM 1.8-2.0 M NACL IN 0.1 M NA ACETATE, PH 4.7 OR 4.8 |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | reservoir | 1.8 (M) | ||
| 2 | 1 | reservoir | sodium acetate | 100 (mM) |






