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1QF3

PEANUT LECTIN COMPLEXED WITH METHYL-BETA-GALACTOSE

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]293
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Spacegroup nameP 21 21 2
Unit cell lengths128.953, 126.683, 77.284
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution10.000 - 2.800
R-factor0.195

*

Rwork0.195
R-free0.24700
Structure solution methodOTHER
Starting model (for MR)PDB2PEL.ENT WITHOUT SUGAR AND WATER
RMSD bond length0.008
RMSD bond angle1.500
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR (3.1)
Refinement softwareX-PLOR (3.1)
Data quality characteristics
 Overall
Low resolution limit [Å]99.000
High resolution limit [Å]2.800
Rmerge0.128
Total number of observations573611

*

Number of reflections31250
Completeness [%]96.5
Redundancy18.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7HANGING DROP OF 5 MG/ML PROTEIN IN 0.05 M SODIUM PHOSPHATE BUFFER,PH 7.0, CONTAINING 0.2M SODIUM CHLORIDE, 0.02 % SODIUM AZIDE, 1.5-10MM METHYL-BETA- GALACTOSE AND 12% (W/V) PEG 8000 IN THE SAME BUFFER, VAPOR DIFFUSION, HANGING DROP
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein5 (mg/ml)
101reservoirsugar1.5-10 (mM)
111reservoirsodium phosphate0.05 (M)
21dropsodium phosphate0.05 (M)
31drop0.2 (M)
41dropsodium azide0.02 (%)
51dropsugar1.5-10 (mM)
61dropPEG800012 (%(w/v))
71reservoirPEG800040 (%(w/v))
81reservoir0.2 (M)
91reservoirsodium azide0.02 (%)

246031

PDB entries from 2025-12-10

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