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1QC0

CRYSTAL STRUCTURE OF A 19 BASE PAIR COPY CONTROL RELATED RNA DUPLEX

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE F1
Synchrotron siteCHESS
BeamlineF1
Temperature [K]100
Detector technologyCCD
Collection date1997-11-15
DetectorADSC QUANTUM 4
Spacegroup nameH 3 2
Unit cell lengths43.682, 43.682, 447.021
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution40.000 - 1.550
R-factor0.15

*

Rwork0.150
R-free0.21440
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)A-RNA
RMSD bond length0.010

*

RMSD bond angle0.018
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareSHELXL-97
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0001.610
High resolution limit [Å]1.5501.550
Rmerge0.0520.452
Number of reflections22779
<I/σ(I)>26.92.7
Completeness [%]91.595

*

Redundancy3.62.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

6.520

*

(NH4)2SO4, SODIUM CACODYLATE, MGCL2, ROP PROTEIN, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
1Vapor diffusion

*

6.520

*

(NH4)2SO4, SODIUM CACODYLATE, MGCL2, ROP PROTEIN, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111(NH4)2SO4
211SODIUM CACODYLATE
311MGCL2
411ROP PROTEIN
512(NH4)2SO4
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropRNA oligo1.0 (mM)
21droprop protein1.0 (mM)
31dropammonium sulfate1.05 (M)
41dropsodium cacodylate5 (mM)
51drop1 (mM)
61dropsodium azide0.02 (%)
71reservoirammonium sulfate2.1 (M)

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PDB entries from 2024-05-15

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