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1Q8I

Crystal structure of ESCHERICHIA coli DNA Polymerase II

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 5ID-B
Synchrotron siteAPS
Beamline5ID-B
Temperature [K]100
Detector technologyCCD
DetectorMARRESEARCH
Wavelength(s)1.0
Spacegroup nameP 21 21 2
Unit cell lengths92.383, 116.596, 82.430
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.000
R-factor0.19872
Rwork0.197
R-free0.23612
Structure solution methodMIRAS
RMSD bond length0.017
RMSD bond angle1.636
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMLPHARE
Refinement softwareREFMAC (5.0)
Data quality characteristics
 Overall
Low resolution limit [Å]29.700
High resolution limit [Å]2.000
Number of reflections60657
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.3295Citrate , PEG3K, DTT, EDTA, Glycerol, pH 5.3, VAPOR DIFFUSION, HANGING DROP, temperature 295K
1VAPOR DIFFUSION, HANGING DROP5.3295Citrate , PEG3K, DTT, EDTA, Glycerol, pH 5.3, VAPOR DIFFUSION, HANGING DROP, temperature 295K
1VAPOR DIFFUSION, HANGING DROP5.3295Citrate , PEG3K, DTT, EDTA, Glycerol, pH 5.3, VAPOR DIFFUSION, HANGING DROP, temperature 295K
1VAPOR DIFFUSION, HANGING DROP5.3295Citrate , PEG3K, DTT, EDTA, Glycerol, pH 5.3, VAPOR DIFFUSION, HANGING DROP, temperature 295K

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PDB entries from 2024-05-15

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