1Q7D
Structure of the integrin alpha2beta1 binding collagen peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID13 |
Synchrotron site | ESRF |
Beamline | ID13 |
Temperature [K] | 85 |
Detector technology | CCD |
Collection date | 2001-01-06 |
Detector | MARRESEARCH |
Wavelength(s) | 1.0 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 29.600, 135.800, 25.400 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 6.000 - 1.800 |
R-factor | 0.2363 |
Rwork | 0.236 |
R-free | 0.25900 * |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.610 * |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.900 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.105 | 0.344 * |
Number of reflections | 5060 | |
<I/σ(I)> | 12.9 | 5 |
Completeness [%] | 98.2 * | 95.2 |
Redundancy | 2.9 * | 4.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 * | 4 * | PEG 8K, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 15 (mg/ml) | |
2 | 1 | reservoir | cacodylate | 0.1 (M) | pH6.5 |
3 | 1 | reservoir | sodium acetate | 0.2 (M) | |
4 | 1 | reservoir | PEG8000 | 30 (%(w/v)) |