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1Q5Y

Nickel-Bound C-terminal Regulatory Domain of NikR

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyCCD
Collection date2002-08-01
DetectorADSC QUANTUM 210
Wavelength(s)1.4852, 0.9500
Spacegroup nameP 21 21 21
Unit cell lengths45.849, 78.287, 81.386
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution10.000 - 1.400
R-factor0.1602
Rwork0.160
R-free0.22000

*

Structure solution methodMAD
RMSD bond length0.010
RMSD bond angle0.029
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareSHELXL-97
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.450
High resolution limit [Å]1.4001.400
Rmerge0.062

*

0.310

*

Total number of observations360689

*

Number of reflections57926
<I/σ(I)>17.53.7
Completeness [%]99.294.2
Redundancy6.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8298PEG 3350, di-sodium tartrate, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
1VAPOR DIFFUSION, HANGING DROP8298PEG 3350, di-sodium tartrate, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropTris20 (mM)pH8.0
31drop300 (mM)
41reservoirdisodium tartrate0.2 (M)
51reservoirPEG335020 (%(w/v))

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PDB entries from 2024-12-25

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