1Q4O
The structure of the polo box domain of human Plk1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 5.2R |
Synchrotron site | ELETTRA |
Beamline | 5.2R |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2003-06-06 |
Detector | MARRESEARCH |
Wavelength(s) | 0.998 |
Spacegroup name | P 1 |
Unit cell lengths | 32.741, 42.021, 80.727 |
Unit cell angles | 103.16, 93.88, 91.32 |
Refinement procedure
Resolution | 20.000 - 2.200 |
R-factor | 0.198 |
Rwork | 0.198 |
R-free | 0.28800 |
Structure solution method | SAD |
Starting model (for MR) | Model derived from a SOLVE phased map from data of a Se-Met derivative |
RMSD bond length | 0.017 |
RMSD bond angle | 1.720 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | SOLVE |
Refinement software | REFMAC (5.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.260 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.050 * | 0.146 * |
Total number of observations | 103961 * | |
Number of reflections | 20156 | |
<I/σ(I)> | 8.4 | 3.6 |
Completeness [%] | 95.2 | 92 |
Redundancy | 2.2 | 2.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 4 * | PEG 4000, sodium citrate and ammonium acetate, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 4 * | PEG 4000, sodium citrate and ammonium acetate, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | reservoir | PEG4000 | 5-10 (%(v/v)) | |
3 | 1 | reservoir | sodium citrate | 0.1 (M) | pH6.0 |
4 | 1 | reservoir | ammonium acetate | 0.1 (M) |