1Q0R
Crystal structure of aclacinomycin methylesterase (RdmC) with bound product analogue, 10-decarboxymethylaclacinomycin T (DcmaT)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X11 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X11 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-04-25 |
Detector | MARRESEARCH |
Wavelength(s) | 0.8094 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 38.200, 84.700, 44.300 |
Unit cell angles | 90.00, 99.99, 90.00 |
Refinement procedure
Resolution | 18.450 - 1.450 |
R-factor | 0.165 |
Rwork | 0.163 |
R-free | 0.18700 |
Structure solution method | MIR |
RMSD bond length | 0.008 |
RMSD bond angle | 1.331 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | REFMAC (5.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 * | 1.530 |
High resolution limit [Å] | 1.450 | 1.450 |
Rmerge | 0.041 * | 0.273 * |
Total number of observations | 234728 * | |
Number of reflections | 34733 | |
<I/σ(I)> | 15.1 | 2 |
Completeness [%] | 84.8 | 63.5 |
Redundancy | 7.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 294 | Ammonium sulphate, PEG400, Hepes, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 294K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | AcmT | 1.2 (mM) | |
2 | 1 | drop | protein | 10 (mg/ml) | |
3 | 1 | drop | Tris-HCl | 50 (mM) | |
4 | 1 | drop | dithiothreitol | 1 (mM) | |
5 | 1 | reservoir | ammonium sulfate | pH7.5 |