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1Q0R

Crystal structure of aclacinomycin methylesterase (RdmC) with bound product analogue, 10-decarboxymethylaclacinomycin T (DcmaT)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X11
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX11
Temperature [K]100
Detector technologyCCD
Collection date2002-04-25
DetectorMARRESEARCH
Wavelength(s)0.8094
Spacegroup nameP 1 21 1
Unit cell lengths38.200, 84.700, 44.300
Unit cell angles90.00, 99.99, 90.00
Refinement procedure
Resolution18.450 - 1.450
R-factor0.165
Rwork0.163
R-free0.18700
Structure solution methodMIR
RMSD bond length0.008
RMSD bond angle1.331
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareREFMAC (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.000

*

1.530
High resolution limit [Å]1.4501.450
Rmerge0.041

*

0.273

*

Total number of observations234728

*

Number of reflections34733
<I/σ(I)>15.12
Completeness [%]84.863.5
Redundancy7.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5294Ammonium sulphate, PEG400, Hepes, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 294K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropAcmT1.2 (mM)
21dropprotein10 (mg/ml)
31dropTris-HCl50 (mM)
41dropdithiothreitol1 (mM)
51reservoirammonium sulfatepH7.5

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PDB entries from 2024-12-25

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