1PVI
STRUCTURE OF PVUII ENDONUCLEASE WITH COGNATE DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 95.800, 86.300, 48.500 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 10.000 - 2.600 |
R-factor | 0.189 |
Rwork | 0.189 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.700 * |
Data reduction software | MADNES |
Refinement software | X-PLOR |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 10.000 * |
High resolution limit [Å] | 2.600 * |
Rmerge | 0.070 |
Total number of observations | 45607 * |
Number of reflections | 10282 * |
Completeness [%] | 92.7 * |
Redundancy | 4.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 4.5 * | 16 * | Balendiran, K., (1994) Proteins: Struct.,Funct., Genet., 19, 77. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | R-PvuII | 9.6 (mg/ml) | |
2 | 1 | drop | duplex DNA | 1.6 (mg/ml) | |
3 | 1 | drop | mother liquor | 18-25 (%) | |
4 | 1 | drop | PEG4000 | 8 (%) | mother liquor |
5 | 1 | drop | EDTA | 0.3 (mM) | mother liquor |
6 | 1 | drop | sodium acetate | 50 (mM) | |
7 | 1 | reservoir | mother liquor | 31-45 (%) |