1PVG
Crystal Structure of the ATPase region of Saccharomyces Cerevisiae topoisomerase II
Experimental procedure
| Experimental method | MAD |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 8.3.1 |
| Synchrotron site | ALS |
| Beamline | 8.3.1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2002-05-16 |
| Detector | ADSC QUANTUM 4 |
| Wavelength(s) | 1.127, 0.9796 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 58.456, 71.081, 216.132 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 30.000 * - 1.800 |
| R-factor | 0.20866 |
| Rwork | 0.206 |
| R-free | 0.24100 * |
| Structure solution method | MAD |
| RMSD bond length | 0.009 |
| RMSD bond angle | 0.996 * |
| Data scaling software | SCALEPACK |
| Phasing software | SOLVE |
| Refinement software | REFMAC (5.1.24) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 30.000 | 1.860 |
| High resolution limit [Å] | 1.800 | 1.800 |
| Rmerge | 0.061 | 0.430 |
| Total number of observations | 1143715 * | |
| Number of reflections | 75706 | |
| <I/σ(I)> | 22 | 2.8 |
| Completeness [%] | 89.5 | 72.7 |
| Redundancy | 6.7 | 4.9 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | unknown * | 7.5 * | 4 * | PEG 1500, Potassium Chloride, Glycerol, Sodium Cacodylate, pH 6.5, microbatch under oil, temperature 293K |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | 1 | protein | 12 (mg/ml) | |
| 2 | 1 | 2 | Tris-HCl | 5 (mM) | pH7.5 |
| 3 | 1 | 2 | 100 (mM) |






