1PIM
DITHIONITE REDUCED E. COLI RIBONUCLEOTIDE REDUCTASE R2 SUBUNIT, D84E MUTANT
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 5ID-B |
Synchrotron site | APS |
Beamline | 5ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 1998-11-20 |
Detector | MARRESEARCH |
Wavelength(s) | 1.0045 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 74.100, 84.600, 114.800 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.000 * - 1.980* |
R-factor | 0.204 |
Rwork | 0.204 |
R-free | 0.24500 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Diferric wildtype ribonucleotide reductase R2 without metal ions or solvent molecules |
RMSD bond length | 0.007 |
RMSD bond angle | 19.300 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | X-PLOR |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.000 * | 2.130 |
High resolution limit [Å] | 1.980 * | 2.000 |
Rmerge | 0.074 * | 0.298 * |
Total number of observations | 480461 * | |
Number of reflections | 49651 * | |
Completeness [%] | 98.7 * | 98.8 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 37 * | 20% PEG 4000, 200mM NaCl, 50mM MES, 0.3% dioxane, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 310K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | drop | HEPES | 100 (mM) | pH7.6 |
3 | 1 | drop | EMTS | 1 (mM) | |
4 | 1 | reservoir | MES | 50 (mM) | pH6.0 |
5 | 1 | reservoir | 200 (mM) | ||
6 | 1 | reservoir | PEG4000 | 20 (%) | |
7 | 1 | reservoir | dioxane | 0.3 (%) | |
8 | 1 | reservoir | EMTS | 1 (mM) |