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1P7N

Dimeric Rous Sarcoma virus Capsid protein structure with an upstream 25-amino acid residue extension of C-terminal of Gag p10 protein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 14-ID-B
Synchrotron siteAPS
Beamline14-ID-B
Temperature [K]298
Detector technologyCCD
Collection date2002-06-20
DetectorADSC QUANTUM 4
Wavelength(s)0.9
Spacegroup nameP 41 21 2
Unit cell lengths47.870, 47.870, 170.390
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution26.500 - 2.600
R-factor0.26
Rwork0.260
R-free0.29800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1em9
RMSD bond length0.110

*

RMSD bond angle2.100

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.540
High resolution limit [Å]2.4502.450
Rmerge0.0550.329
Number of reflections6743
Completeness [%]85.251.4
Redundancy3.18

*

1.4

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

8

*

20

*

10 mM HEPES-sodium buffer and 0.8M potassium sodium tartrate tetrahydrate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein12 (mg/ml)
21dropTris-HCl10 (mM)pH8.0
31drop25 (mM)
41reservoirsodium HEPES0.1 (M)pH7.5
51reservoirpotassium sodium tartrate tetrahydrate0.8 (M)

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PDB entries from 2024-12-25

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