1OVN
Crystal Structure and Functional Analysis of Drosophila Wind-- a PDI-Related Protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X11 |
Synchrotron site | EMBL/DESY, Hamburg |
Beamline | X11 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-07-31 |
Detector | MARRESEARCH |
Wavelength(s) | 0.811 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 106.678, 50.358, 98.616 |
Unit cell angles | 90.00, 112.84, 90.00 |
Refinement procedure
Resolution | 37.640 * - 1.900 |
R-factor | 0.2179 |
Rwork | 0.216 |
R-free | 0.25570 * |
Structure solution method | SIRAS |
Starting model (for MR) | NONE |
RMSD bond length | 0.023 |
RMSD bond angle | 2.130 * |
Data reduction software | XPREP |
Data scaling software | SCALEPACK |
Phasing software | SHELXD |
Refinement software | REFMAC (5.1.19) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.640 | 2.000 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.196 * | |
Number of reflections | 38218 | |
<I/σ(I)> | 13.96 | 4.77 |
Completeness [%] | 0.0 * | 99.6 |
Redundancy | 4.5 | 3.79 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 * | 20 * | mixing 6ul [5.8mg/ml Wind in 5mM HEPES pH7.5, 25mM NaCl, 0.0025%(V/V) beta-mercaptoethanol] with 3ul [0.1M MES pH6.1, 0.1M CsCl, 2mM CaCl2, 16%(V/V) PEG 300] cryo-condition: 0.1M Mes pH6.1, 20%(V/V) PEG 300, 10%(V/V)glycerol, 0.1M CsCl, 2mM CaCl2, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 5.8 (mg/ml) | |
2 | 1 | drop | HEPES | 5 (mM) | pH7.5 |
3 | 1 | drop | 25 (mM) | ||
4 | 1 | drop | beta-mercaptoethanol | 0.0025 (%(v/v)) | |
5 | 1 | reservoir | MES | 0.1 (M) | pH6.1 |
6 | 1 | reservoir | 0.1 (M) | ||
7 | 1 | reservoir | 2 (mM) | ||
8 | 1 | reservoir | PEG300 | 16 (%(v/v)) |