1ORE
Human Adenine Phosphoribosyltransferase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE D03B-MX1 |
Synchrotron site | LNLS |
Beamline | D03B-MX1 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2002-08-04 |
Detector | MARRESEARCH |
Wavelength(s) | 1.4538 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 58.309, 58.309, 109.535 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 * - 2.100 |
R-factor | 0.13514 |
Rwork | 0.133 |
R-free | 0.17600 * |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.016 |
RMSD bond angle | 1.618 |
Data scaling software | CCP4 ((SCALA)) |
Phasing software | AMoRE |
Refinement software | REFMAC (5.1.24) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 * | |
High resolution limit [Å] | 2.100 | 2.100 * |
Rmerge | 0.040 * | 0.112 * |
Total number of observations | 95875 * | |
Number of reflections | 11527 | |
Completeness [%] | 99.3 | 97 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 * | 291 | 15.0 % (V/V) glycerol, 25.5 % (w/V) polyethylene glycol 4000, 0.17 mol/L sodium acetate and 0.085 mol/L Tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | glycerol | 15.0 (%(v/v)) | |
2 | 1 | reservoir | PEG4000 | 25.5 (%(w/v)) | |
3 | 1 | reservoir | sodium acetate | 0.17 (M) | |
4 | 1 | reservoir | Tris-HCl | 0.085 (M) | pH8.5 |
5 | 1 | drop | protein | 6 (mg/ml) | |
6 | 1 | drop | AMP | 2 (mM) | |
7 | 1 | drop | Tris-HCl | 20 (mM) | pH7.4 |
8 | 1 | drop | 5 (mM) |