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1ORE

Human Adenine Phosphoribosyltransferase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsLNLS BEAMLINE D03B-MX1
Synchrotron siteLNLS
BeamlineD03B-MX1
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2002-08-04
DetectorMARRESEARCH
Wavelength(s)1.4538
Spacegroup nameP 43 21 2
Unit cell lengths58.309, 58.309, 109.535
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.000

*

- 2.100
R-factor0.13514
Rwork0.133
R-free0.17600

*

Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.016
RMSD bond angle1.618
Data scaling softwareCCP4 ((SCALA))
Phasing softwareAMoRE
Refinement softwareREFMAC (5.1.24)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.000

*

High resolution limit [Å]2.1002.100

*

Rmerge0.040

*

0.112

*

Total number of observations95875

*

Number of reflections11527
Completeness [%]99.397

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.4

*

29115.0 % (V/V) glycerol, 25.5 % (w/V) polyethylene glycol 4000, 0.17 mol/L sodium acetate and 0.085 mol/L Tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirglycerol15.0 (%(v/v))
21reservoirPEG400025.5 (%(w/v))
31reservoirsodium acetate0.17 (M)
41reservoirTris-HCl0.085 (M)pH8.5
51dropprotein6 (mg/ml)
61dropAMP2 (mM)
71dropTris-HCl20 (mM)pH7.4
81drop5 (mM)

219869

PDB entries from 2024-05-15

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