1OQR
Crystal structure of C73S mutant of putidaredoxin, a [2Fe-2S] ferredoxin from Pseudomonas putida, at 1.65A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 110 |
Detector technology | IMAGE PLATE |
Collection date | 2002-12-18 |
Detector | MARRESEARCH |
Wavelength(s) | 1.08 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 66.219, 66.219, 152.131 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.650 - 1.670 * |
R-factor | 0.237 |
Rwork | 0.237 |
R-free | 0.25700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | putidaredoxin C73S/C85S mutant PDB ID code 1OQQ |
RMSD bond length | 0.006 |
RMSD bond angle | 1.500 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS (1.1) |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.680 |
High resolution limit [Å] | 1.670 * | 1.650 |
Rmerge | 0.055 * | 0.618 |
Number of reflections | 39004 * | |
<I/σ(I)> | 6.5 | 1.88 |
Completeness [%] | 96.7 * | 97.8 |
Redundancy | 4.5 | 4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 * | 298 | lithium sulfate, sodium citrate, dithiothreitol, pH 5.9, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 20 (mg/ml) | |
2 | 1 | drop | Bis-Tris propane/acetate | 100 (mM) | pH7.4 |
3 | 1 | reservoir | lithium sulfate | 1.5 (M) | |
4 | 1 | reservoir | sodium citrate | 50 (mM) | pH5.7 |