Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1OP9

Complex of human lysozyme with camelid VHH HL6 antibody fragment

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2001-03-01
DetectorMARRESEARCH
Wavelength(s)1.5418
Spacegroup nameP 1 21 1
Unit cell lengths39.611, 48.226, 66.605
Unit cell angles90.00, 98.98, 90.00
Refinement procedure
Resolution31.000 - 1.860
R-factor0.197
Rwork0.196
R-free0.23800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)antibody: 1jto lysozyme: 133l
RMSD bond length0.008
RMSD bond angle0.023
Data reduction softwareDENZO
Data scaling softwareSCALA
Phasing softwareAMoRE
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.930
High resolution limit [Å]1.8601.860
Rmerge0.0660.229
Number of reflections20015
<I/σ(I)>13.85.7
Completeness [%]95.389
Redundancy4.43.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP620

*

20 % W/V PEG4000, 0.2M imidazole malate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein0.2 (mM)
21reservoirPEG400020 (%(w/v))
31reservoirimidazole-malate0.2 (M)pH6.0

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon