1OP9
Complex of human lysozyme with camelid VHH HL6 antibody fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2001-03-01 |
Detector | MARRESEARCH |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 39.611, 48.226, 66.605 |
Unit cell angles | 90.00, 98.98, 90.00 |
Refinement procedure
Resolution | 31.000 - 1.860 |
R-factor | 0.197 |
Rwork | 0.196 |
R-free | 0.23800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | antibody: 1jto lysozyme: 133l |
RMSD bond length | 0.008 |
RMSD bond angle | 0.023 |
Data reduction software | DENZO |
Data scaling software | SCALA |
Phasing software | AMoRE |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.930 |
High resolution limit [Å] | 1.860 | 1.860 |
Rmerge | 0.066 | 0.229 |
Number of reflections | 20015 | |
<I/σ(I)> | 13.8 | 5.7 |
Completeness [%] | 95.3 | 89 |
Redundancy | 4.4 | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 20 * | 20 % W/V PEG4000, 0.2M imidazole malate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 0.2 (mM) | |
2 | 1 | reservoir | PEG4000 | 20 (%(w/v)) | |
3 | 1 | reservoir | imidazole-malate | 0.2 (M) | pH6.0 |