1OOP
The Crystal Structure of Swine Vesicular Disease Virus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SRS BEAMLINE PX14.2 |
Synchrotron site | SRS |
Beamline | PX14.2 |
Temperature [K] | 298 |
Detector technology | CCD |
Collection date | 2000-02-29 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.979 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 354.100, 371.700, 318.600 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 15.000 - 3.000 |
R-factor | 0.245 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Coxsackievirus A9 |
RMSD bond length | 0.018 |
RMSD bond angle | 2.200 |
Data scaling software | SCALEPACK |
Phasing software | X-PLOR |
Refinement software | X-PLOR (3.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 3.110 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.207 | 0.482 |
Number of reflections | 406689 | |
<I/σ(I)> | 5.1 | |
Completeness [%] | 49.2 | 46 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.6 | 298 | 15-25% saturated ammonium sulfate, 100mM phosphate buffer, pH 7.6, VAPOR DIFFUSION, SITTING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | reservoir | ammonium sulfate | 15-25 (%sat) | |
3 | 1 | reservoir | phosphate buffer | 100 (mM) | pH7.6 |