1O9H
rRNA methyltransferase aviRa from Streptomyces viridochromogenes at 2.4A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200B |
Temperature [K] | 287 |
Detector technology | AREA DETECTOR |
Collection date | 2002-01-11 |
Detector | BRUKER |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 37.098, 48.937, 63.714 |
Unit cell angles | 90.00, 99.05, 90.00 |
Refinement procedure
Resolution | 30.000 * - 2.400 |
R-factor | 0.211 |
Rwork | 0.209 |
R-free | 0.24100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1o9g |
RMSD bond length | 0.010 |
RMSD bond angle | 1.190 * |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | AMoRE |
Refinement software | REFMAC (5.1.24) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 * | 2.460 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.057 * | 0.210 * |
Total number of observations | 19577 * | |
Number of reflections | 8093 * | 921 * |
<I/σ(I)> | 38.7 | 3.2 |
Completeness [%] | 91.0 * | 91 * |
Redundancy | 2.3 | 1.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 6.6 | 20 * | MES 6.6,PEG 20K 11%, pH 6.60 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 4 (mg/ml) | |
2 | 1 | reservoir | MES | 100 (mM) | pH6.6-6.9 |
3 | 1 | reservoir | PEG20000 | 6-8 (%(w/v)) |