Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1O8K

Pectate Lyase C from Erwinia Chrysanthemi at pH 4.5 with 20mM CA2+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RT3000
Temperature [K]293
Detector technologyAREA DETECTOR
DetectorSDMS
Spacegroup nameP 21 21 21
Unit cell lengths71.910, 80.990, 95.840
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution10.000 - 2.200
R-factor0.1807
Rwork0.181
R-free0.20790
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1air
RMSD bond length0.005
RMSD bond angle24.820

*

Data reduction softwareSDMS
Data scaling softwareSDMS
Phasing softwareX-PLOR
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 Overall
Low resolution limit [Å]10.000
High resolution limit [Å]2.200
Rmerge0.049
Total number of observations171235

*

Number of reflections38724
<I/σ(I)>12.31
Completeness [%]99.9
Redundancy4.42
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, sitting drop

*

6.9

*

4

*

Yoder, M. D., (1990) J. Biol. Chem., 265, 11429.

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein5 (A280/ml)
21dropammonium sulfate1.0 (M)
31dropHEPES50 (mM)
41drop1 (mM)
51reservoirammonium sulfate2.0 (M)
61reservoirHEPES0.1 (M)

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon