1O05
Apo form of human mitochondrial aldehyde dehydrogenase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 110 |
Detector technology | IMAGE PLATE |
Collection date | 1999-11-03 |
Detector | RIGAKU RAXIS IIC |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 141.180, 151.940, 177.120 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.000 * - 2.250 |
R-factor | 0.18 |
Rwork | 0.174 |
R-free | 0.22600 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1cw3 |
RMSD bond length | 0.007 * |
RMSD bond angle | 23.600 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.000 * | 2.330 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.072 | 0.214 |
Total number of observations | 500412 * | |
Number of reflections | 165756 | |
<I/σ(I)> | 14.3 | 3.5 |
Completeness [%] | 91.4 | 62 |
Redundancy | 3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | unknown * | 6.2 * | 293 | Ni, L., (1999) Protein Sci., 8, 2784. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | 1 | protein | 8 (mg/ml) | |
2 | 1 | 2 | ACES | 100 (mM) | |
3 | 1 | 2 | guanidine-HCl | 100 (mM) | |
4 | 1 | 2 | NAD+ | 2 (mM) | |
5 | 1 | 2 | dithiothreitol | 3 (mM) | |
6 | 1 | 2 | PEG6000 | 17 (%(w/v)) |