Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1NZZ

Human mitochondrial aldehyde dehydrogenase complexed with NADH in the presence of low Mg2+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]110
Detector technologyIMAGE PLATE
Collection date2002-10-18
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths141.307, 150.897, 177.031
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution25.000

*

- 2.450
R-factor0.22
Rwork0.215
R-free0.24800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1cw3
RMSD bond length0.008

*

RMSD bond angle1.240

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]25.000

*

2.540
High resolution limit [Å]2.4502.450
Rmerge0.0870.347
Total number of observations630390

*

Number of reflections130904
<I/σ(I)>13.33.3
Completeness [%]94.170.4
Redundancy4.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.420

*

ACES, PEG 6000, Guanidine HCl, MgCl2, DTT. Crystal soaked at increasing pH and decreasing concentrations of Mg2+ and then with NADH and 0.2 mM Mg2+ at pH 7.0 prior to data collection., pH 6.4, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirsodium-ACES100 (mM)pH6.2-6.6
21reservoirPEG6000MW15-19 (%(w/v))
31reservoirguanidine-HCl100 (mM)
41reservoir10 (mM)
51reservoirdithiothreitol8 (mM)
61dropprotein8 (mg/ml)

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon