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1NW1

Crystal Structure of Choline Kinase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 5ID-B
Synchrotron siteAPS
Beamline5ID-B
Temperature [K]110
Detector technologyCCD
Collection date2002-08-30
DetectorMARRESEARCH
Wavelength(s)1.0023
Spacegroup nameP 1 21 1
Unit cell lengths55.372, 102.141, 85.369
Unit cell angles90.00, 90.66, 90.00
Refinement procedure
Resolution37.500

*

- 2.000

*

R-factor0.209
Rwork0.209
R-free0.23100
Structure solution methodMAD
RMSD bond length0.006
RMSD bond angle21.100

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSHARP
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0002.070
High resolution limit [Å]2.0002.000
Rmerge0.064

*

0.302

*

Total number of observations195184

*

Number of reflections60790

*

<I/σ(I)>143.3
Completeness [%]99.1

*

99.8
Redundancy3.23.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP823

*

PEG 2000, calcium acetate, bicine, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 296K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropcholine kinase4 (mg/ml)
21dropbicine20 (mM)pH8.0
31dropEGTA1 (mM)
41dropbeta-mercaptoethanol2 (mM)
51dropnondetergent sulfobetaine2012 (M)
61reservoirPEG20008-10 (%)
71reservoircalcium acetate200 (mM)
81reservoirbicine100 (mM)pH8.0

246031

PDB entries from 2025-12-10

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