1NVA
Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+ and ADP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2000-07-01 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 41.010, 68.910, 137.710 |
Unit cell angles | 90.00, 94.71, 90.00 |
Refinement procedure
Resolution | 35.000 * - 2.800* |
Rwork | 0.198 |
R-free | 0.25400 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1nrx |
RMSD bond length | 0.007 * |
RMSD bond angle | 1.260 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.000 * | 2.710 |
High resolution limit [Å] | 2.800 * | 2.800 * |
Rmerge | 0.067 * | 0.377 * |
Number of reflections | 22806 | |
<I/σ(I)> | 14.06 | 1.05 |
Completeness [%] | 99.6 * | 95.9 * |
Redundancy | 4.81 * | 3.38 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.8 * | 277 | Nichols, C.E., (2001) Acta Crystallogr., Sect.D, 57, 306. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 15-25 (mg/ml) | |
2 | 1 | reservoir | PEG3350 | 17 (%) | |
3 | 1 | reservoir | HEPES | pH6.8 | |
4 | 1 | reservoir | ammonium tartrate | 0.2 (M) |