1NUD
Role of Calcium Ions in the Activation and Activity of the Transglutaminase 3 Enzyme (3 calciums, active form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2000-06-07 |
Detector | RIGAKU RAXIS IIC |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 57.540, 115.370, 121.390 |
Unit cell angles | 90.00, 92.66, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.700 |
Rwork | 0.199 |
R-free | 0.26500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1l9n |
RMSD bond length | 0.006 |
RMSD bond angle | 1.300 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.870 |
High resolution limit [Å] | 2.700 | 2.700 |
Total number of observations | 409995 * | |
Number of reflections | 41052 | |
<I/σ(I)> | 8.9 | |
Completeness [%] | 93.7 | 88.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 * | 21 * | 4% (w/v) Peg 20K, 100 mM Tris-HCl (pH 8.5) , VAPOR DIFFUSION, HANGING DROP, temperature 288K |
1 | VAPOR DIFFUSION, HANGING DROP | 8 * | 21 * | 4% (w/v) Peg 20K, 100 mM Tris-HCl (pH 8.5) , VAPOR DIFFUSION, HANGING DROP, temperature 288K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | beta-octylglucoside | 0.1 (mM) | |
3 | 1 | drop | Tris-HCl | 20 (mM) | pH8.0 |
4 | 1 | drop | EDTA | 1 (mM) | |
5 | 1 | drop | 125 (mg/ml) | ||
6 | 1 | drop | protein | 17 (mg/ml) | |
7 | 1 | reservoir | PEG20000 | 4 (%(w/v)) | |
8 | 1 | reservoir | Tris-HCl | 100 (mM) | pH8.5 |