1NRX
Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+ and NAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2000-02-01 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 72.400, 83.500, 149.000 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 * - 2.900 |
R-factor | 0.2 |
Rwork | 0.200 |
R-free | 0.29900 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1dqs |
RMSD bond length | 0.006 * |
RMSD bond angle | 1.170 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 3.000 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.108 | 0.354 |
Number of reflections | 19328 | |
<I/σ(I)> | 5.99 | 1.55 |
Completeness [%] | 93.6 | 90.1 |
Redundancy | 2.85 | 2.19 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 277 | Nichols, C.E., (2001) Acta Crystallogr., Sect.D, 57, 306. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 15-25 (mg/ml) | |
2 | 1 | reservoir | PEG6000 | 7 (%) | |
3 | 1 | reservoir | HEPES | pH8.0 | |
4 | 1 | reservoir | DMSO | 30 (%) |