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1NR1

Crystal structure of the R463A mutant of human Glutamate dehydrogenase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2000-06-06
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 1
Unit cell lengths96.920, 98.640, 124.260
Unit cell angles86.48, 69.69, 60.87
Refinement procedure
Resolution20.000

*

- 3.300
R-factor0.222
Rwork0.222
R-free0.27600

*

Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.017

*

RMSD bond angle1.980

*

Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.000

*

3.450
High resolution limit [Å]3.3003.300
Rmerge0.032

*

0.137

*

Number of reflections50903
Completeness [%]64.6

*

62.9

*

Redundancy1.4

*

1.3

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.8298sodium phosphate, PEG 8000, BOG, sodium chloride, MPD, sodium azide, pH 6.8, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropsodium phosphate0.1 (M)pH6.8
21dropprotein26 (mg/ml)
31reservoirPEG800010 (%(w/v))
41reservoir0.1 (M)
51reservoiroctyl-beta-glucopyranoside1.3 (%(w/v))
61reservoirMPD7.5 (%(v/v))
71reservoirsodium phosphate0.1 (M)pH6.8
81reservoirsodium azide1 (mM)

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PDB entries from 2024-12-25

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