Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1NKX

CRYSTAL STRUCTURE OF A PROTEOLYTICALLY GENERATED FUNCTIONAL MONOFERRIC C-LOBE OF BOVINE LACTOFERRIN AT 1.9A RESOLUTION

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU300
Temperature [K]283
Detector technologyIMAGE PLATE
Collection date2002-07-12
DetectorMARRESEARCH
Wavelength(s)1.5418
Spacegroup nameP 1 21 1
Unit cell lengths63.359, 50.471, 65.934
Unit cell angles90.00, 107.72, 90.00
Refinement procedure
Resolution20.000 - 1.900
R-factor0.202
Rwork0.192
R-free0.22100

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1blf
RMSD bond length0.005
RMSD bond angle1.300
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.1.19)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.000
High resolution limit [Å]1.9001.900
Rmerge0.0570.230
Total number of observations172337

*

Number of reflections29084
<I/σ(I)>17.53.6
Completeness [%]97.084
Redundancy20.

*

4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION6.525

*

0.1M MES, 25% POLYETHYLENE GLYCOL MONOMETHYL ETHER 550 AND 0.01 M ZINC SULPHATE, pH 6.5, VAPOR DIFFUSION, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein50 (mg/ml)
21reservoirMES0.1 (M)pH6.5
31reservoirPEG550 MME25 (%(v/v))
41reservoirzinc sulphate heptahydrate0.01 (M)

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon