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1NKB

A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE-THYMINE MISMATCH AFTER THREE ROUNDS OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP, DGTP, AND DTTP.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date1998-12-31
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths88.239, 93.698, 105.444
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000

*

- 2.000
R-factor0.224
Rwork0.205
R-free0.24300

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2bdp
RMSD bond length0.006
RMSD bond angle22.800

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.000

*

2.070
High resolution limit [Å]2.0002.000
Rmerge0.069

*

0.326

*

Total number of observations185081

*

Number of reflections52699
<I/σ(I)>18.92
Completeness [%]88.353.7
Redundancy3.51.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.8290Johnson, S.J., (2003) Proc.Natl.Acad.Sci.USA, 100, 3895.

*

Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111AMMONIUM SULFATE
211MAGNESIUM SULFATE
311MPD
411MES
511water
612AMMONIUM SULFATE
712MAGNESIUM SULFATE
812MPD
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein12 (mg/ml)
21reservoirammonium sulfate49 (%sat)
31reservoir2.5 (%(v/v))
41reservoir100 (mM)pH5.8
51reservoir10 (mM)

239149

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