1NJX
THYMINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2002-12-06 |
| Detector | MARRESEARCH |
| Wavelength(s) | 1.0064 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 88.331, 93.554, 104.898 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 30.000 * - 1.650 |
| R-factor | 0.226 |
| Rwork | 0.211 |
| R-free | 0.23900 * |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2bdp |
| RMSD bond length | 0.005 |
| RMSD bond angle | 22.300 * |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | CNS |
| Refinement software | CNS |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 30.000 * | 1.710 |
| High resolution limit [Å] | 1.650 | 1.650 |
| Rmerge | 0.071 * | 0.468 * |
| Total number of observations | 603440 * | |
| Number of reflections | 100253 | |
| <I/σ(I)> | 22.1 | 1.7 |
| Completeness [%] | 95.2 | 69 |
| Redundancy | 6 | 2.8 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.8 | 290 | Johnson, S.J., (2003) Proc.Natl.Acad.Sci.USA, 100, 3895. * |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.8 | 290 | Johnson, S.J., (2003) Proc.Natl.Acad.Sci.USA, 100, 3895. * |
Crystallization Reagents
| ID | crystal ID | solution ID | reagent name | concentration | details |
| 1 | 1 | 1 | AMMONIUM SULFATE | ||
| 2 | 1 | 1 | MAGNESIUM SULFATE | ||
| 3 | 1 | 1 | MPD | ||
| 4 | 1 | 1 | MES | ||
| 5 | 1 | 1 | WATER | ||
| 6 | 1 | 2 | AMMONIUM SULFATE | ||
| 7 | 1 | 2 | MAGNESIUM SULFATE | ||
| 8 | 1 | 2 | MPD |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | protein | 12 (mg/ml) | |
| 2 | 1 | reservoir | ammonium sulfate | 49 (%sat) | |
| 3 | 1 | reservoir | 2.5 (%(v/v)) | ||
| 4 | 1 | reservoir | 100 (mM) | pH5.8 | |
| 5 | 1 | reservoir | 10 (mM) |






