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1NGT

The Role of Minor Groove Functional Groups in DNA Hydration

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsSIEMENS
Temperature [K]163
Detector technologyCCD
Collection date2000-01-01
DetectorSIEMENS
Wavelength(s)0.7107
Spacegroup nameP 21 21 21
Unit cell lengths25.170, 41.050, 65.720
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution10.000 - 2.040
R-factor0.223
Rwork0.207
R-free0.28150

*

Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.220

*

Data reduction softwareSAINT
Data scaling softwareSAINT
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]10.0002.110
High resolution limit [Å]2.0402.040
Rmerge0.084

*

Total number of observations30312

*

Number of reflections4393
Completeness [%]74
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.522

*

sodium cacodylate, MPD, magnesium chloride, spermine tetrahydrochloride, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111sodium cacodylate
211MPD
311magnesium chloride
411spermine tetrahydrochloride
512sodium cacodylate
612MPD
712magnesium chloride
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein1.9 (mM)
21dropsodium cacodylate31 (mM)pH6.5
31drop19 (mM)
41dropMPD6.9 (%)
51dropspermine tetrahydrochloride4.9 (mM)
61reservoir40 (%)

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PDB entries from 2024-05-15

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