Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1NG3

Complex of ThiO (glycine oxidase) with acetyl-glycine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 8-BM
Synchrotron siteAPS
Beamline8-BM
Temperature [K]100
Detector technologyCCD
Collection date2002-01-01
DetectorADSC QUANTUM 315
Wavelength(s)0.9791
Spacegroup nameP 61 2 2
Unit cell lengths139.378, 139.378, 208.155
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution50.000

*

- 2.600
R-factor0.208
Rwork0.208
R-free0.23900

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)MAD Phased Structure of ThiO
RMSD bond length0.007
RMSD bond angle23.200

*

Data reduction softwareMOSFLM
Data scaling softwareCCP4 ((SCALA))
Phasing softwareCNS
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.000
High resolution limit [Å]2.600
Rmerge0.068

*

0.311

*

Total number of observations164553

*

Number of reflections34445

*

Completeness [%]96.496.4

*

Redundancy4.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.15295PEG MME 2000, HEPES, pH 7.15, VAPOR DIFFUSION, HANGING DROP, temperature 295.0K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21reservoirPEG2000 MME18 (%)
31reservoirHEPES100 (mM)pH7.15

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon