1NG0
The three-dimensional structure of Cocksfoot mottle virus at 2.7A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-4 |
Synchrotron site | ESRF |
Beamline | ID14-4 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-07-14 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.95 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 291.069, 537.250, 555.158 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 - 2.700 |
R-factor | 0.281 |
Rwork | 0.281 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | rice yellow mottle virus (1F2N) |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | GLRF |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.820 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.190 | 0.990 * |
Number of reflections | 1653761 * | 153029 * |
Completeness [%] | 79.0 | 70 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 3.3 | 296 | 0.25 M sodium succinate, 0.5 % PEG 8000, pH 3.3, VAPOR DIFFUSION, HANGING DROP, temperature 296K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | reservoir | sodium succinate | 0.25 (M) | pH3.3 |
3 | 1 | reservoir | PEG8000 | 0.5 (%) |