Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1NF2

X-ray crystal structure of TM0651 from Thermotoga maritima

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.1
Synchrotron siteALS
Beamline5.0.1
Temperature [K]100
Detector technologyCCD
Collection date2001-06-23
DetectorADSC QUANTUM 4
Wavelength(s)1.0000
Spacegroup nameC 1 2 1
Unit cell lengths158.410, 93.880, 98.420
Unit cell angles90.00, 127.91, 90.00
Refinement procedure
Resolution20.000

*

- 2.200
R-factor0.217
Rwork0.217
R-free0.26300
Structure solution methodSAD
RMSD bond length0.012
RMSD bond angle1.360

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]83.3002.240
High resolution limit [Å]2.2002.200
Rmerge0.096

*

0.353

*

Number of reflections577852866

*

<I/σ(I)>15.33.2
Completeness [%]99.899.7
Redundancy3.73.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.5293AMS, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein108 (mg/ml)
21dropTris-HCl50 (mM)pH6.8
31drop220 (mM)
41dropdithiothreitol5 (mM)
51dropammonium sulfate1.0 (M)
61dropcitric acid0.1 (M)pH5.5
71reservoirammonium sulfate1.0 (M)
81reservoircitric acid0.1 (M)pH5.5

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon