1NBO
The dual coenzyme specificity of photosynthetic glyceraldehyde-3-phosphate dehydrogenase interpreted by the crystal structure of A4 isoform complexed with NAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 5.2R |
Synchrotron site | ELETTRA |
Beamline | 5.2R |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2001-07-12 |
Detector | MARRESEARCH |
Wavelength(s) | 1.000 |
Spacegroup name | C 2 2 2 |
Unit cell lengths | 140.644, 185.652, 106.446 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 8.000 * - 2.600 |
Rwork | 0.203 |
R-free | 0.24500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1jn0 |
RMSD bond length | 0.006 |
RMSD bond angle | 23.700 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 90.000 | 2.690 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.090 | 0.200 * |
Total number of observations | 679015 * | |
Number of reflections | 43271 * | |
<I/σ(I)> | 26 | 9.3 |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 8.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 * | 293 | ammonium sulfate 2 M, Tris-HCl, 0.1 M, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 * | 293 | ammonium sulfate 2 M, Tris-HCl, 0.1 M, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 * | 293 | ammonium sulfate 2 M, Tris-HCl, 0.1 M, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | ammonium sulfate | 1 (M) | |
2 | 1 | reservoir | Tris-HCl | 0.1 (M) | pH8 |
3 | 1 | drop | protein | 10 (mg/ml) | |
4 | 1 | drop | Tris-HCl | 25 (mM) | pH7.5 |
5 | 1 | drop | NAD | 1 (mM) |