1N5X
Xanthine Dehydrogenase from Bovine Milk with Inhibitor TEI-6720 Bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL40B2 |
Synchrotron site | SPring-8 |
Beamline | BL40B2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-03-22 |
Detector | ADSC QUANTUM 4r |
Wavelength(s) | 1.000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 168.269, 124.659, 147.325 |
Unit cell angles | 90.00, 90.99, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.800 |
R-factor | 0.244 * |
Rwork | 0.244 |
R-free | 0.27500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB 1FO4 |
RMSD bond length | 0.010 |
RMSD bond angle | 23.400 * |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | EPMR |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.850 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.116 * | 0.438 * |
Number of reflections | 74031 | |
<I/σ(I)> | 9.59 | 2.17 |
Completeness [%] | 99.0 * | 98.3 * |
Redundancy | 3.24 | 2.84 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | unknown * | 20 * | PEG4000, DTT, Glycerol, Batch Slide, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | 1 | enzyme | 7.5 (mg/ml) | |
2 | 1 | 2 | potassium phosphate | 50 (mM) | pH6.5 |
3 | 1 | 2 | dithiothreitol | 5 (mM) | |
4 | 1 | 2 | salicylate | 1 (mM) | |
5 | 1 | 2 | EDTA | 0.2 (mM) | |
6 | 1 | 2 | glycerol | 30 (%) | |
7 | 1 | 2 | TEI-6720 | 0.5 (mM) | |
8 | 1 | 2 | PEG4000 | 6-10 (%(w/v)) |