1N21
(+)-Bornyl Diphosphate Synthase: Cocrystal with Mg and 3-aza-2,3-dihydrogeranyl diphosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 14-BM-C |
Synchrotron site | APS |
Beamline | 14-BM-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-04-21 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.900 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 198.380, 198.380, 122.840 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.930 - 3.100 |
R-factor | 0.207 |
Rwork | 0.207 |
R-free | 0.23300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1n1b |
RMSD bond length | 0.006 |
RMSD bond angle | 19.200 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 3.210 |
High resolution limit [Å] | 3.100 | 3.100 |
Number of reflections | 26476 | |
<I/σ(I)> | 33 | 13.6 |
Completeness [%] | 100.0 | 99.8 |
Redundancy | 33 | 10.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.8 * | 21 * | PEG 8000, glycerol, bis-tris, magnesium chloride, dithiothreitol, 2-aza-2,3-dihydrogeranyl diphosphate , pH 6.6, VAPOR DIFFUSION, HANGING DROP, temperature 294K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | enzyme | 8 (mg/ml) | |
2 | 1 | drop | dithiothreitol | 1 (mM) | |
3 | 1 | drop | Bis-Tris | 20 (mM) | pH6.8 |
4 | 1 | reservoir | PEG8000 | 10 (%(w/v)) | |
5 | 1 | reservoir | glycerol | 15 (%(v/v)) | |
6 | 1 | reservoir | dithiothreitol | 2 (mM) | or 1mM potassium mercury thiocyanate |
7 | 1 | reservoir | 220 (mM) | ||
8 | 1 | reservoir | Bis-Tris | 0.1 (M) | pH6.6 |