1MXS
Crystal structure of 2-keto-3-deoxy-6-phosphogluconate (KDPG) aldolase from Pseudomonas putida.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 296 |
Detector technology | IMAGE PLATE |
Detector | RIGAKU RAXIS II |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 3 |
Unit cell lengths | 103.300, 103.300, 103.300 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 9999.000 * - 2.200 |
R-factor | 0.171 |
Rwork | 0.171 |
R-free | 0.21400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1eun |
RMSD bond length | 0.006 |
RMSD bond angle | 22.400 * |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 9.980 | 50.000 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.046 * | |
Total number of observations | 66178 * | |
Number of reflections | 9901 | |
Completeness [%] | 52.3 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICRODIALYSIS | 3.5 | 296 | ammonium sulfate, KH2PO4, pH 3.5, MICRODIALYSIS, temperature 296K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | 1 | protein | 15 (mg/ml) | |
2 | 1 | 2 | ammonium sulfate | 1.5 (M) | |
3 | 1 | 2 | 0.1 (M) | pH3.5 |