1MSW
Structural basis for the transition from initiation to elongation transcription in T7 RNA polymerase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.9790 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 142.910, 145.460, 145.600 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.100 |
R-factor | 0.241 |
Rwork | 0.241 |
R-free | 0.27300 * |
Structure solution method | MAD |
RMSD bond length | 0.008 |
RMSD bond angle | 21.000 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | |
High resolution limit [Å] | 2.100 | |
Rmerge | 0.082 * | |
Number of reflections | 61181 | |
Completeness [%] | 89.2 * | 55.4 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 7 | 294 | PEG 8000, LiSO4, Mg(OAc)2, Tris-HCL, pH 7.0, VAPOR DIFFUSION, HANGING DROP at 294K |
1 | Vapor diffusion * | 7 | 294 | PEG 8000, LiSO4, Mg(OAc)2, Tris-HCL, pH 7.0, VAPOR DIFFUSION, HANGING DROP at 294K |
Crystallization Reagents
ID | crystal ID | solution ID | reagent name | concentration | details |
1 | 1 | 1 | PEG 8000 | ||
2 | 1 | 1 | LiSO4 | ||
3 | 1 | 1 | Mg(OAc)2 | ||
4 | 1 | 1 | Tris-HCL | ||
5 | 1 | 2 | PEG 8000 | ||
6 | 1 | 2 | LiSO4 | ||
7 | 1 | 2 | Mg(OAc)2 | ||
8 | 1 | 2 | Tris-HCL |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | Tris-HCl | 50 (mM) | pH7.0 |
2 | 1 | reservoir | 200 (mM) | ||
3 | 1 | reservoir | PEG8000 | 6 (%) | |
4 | 1 | reservoir | magnesium acetate | 10 (mM) | |
5 | 1 | reservoir | dithiothreitol | 5 (mM) |