1MQT
Swine Vesicular Disease Virus coat protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-4 |
Synchrotron site | ESRF |
Beamline | ID14-4 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-06-19 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.939 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 318.350, 349.960, 371.720 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 3.000 * |
Rwork | 0.257 |
R-free | 0.27900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1cov |
RMSD bond length | 0.012 * |
RMSD bond angle | 1.900 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | DM |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 3.500 |
High resolution limit [Å] | 3.000 * | 3.000 * |
Rmerge | 0.100 * | 0.191 * |
Total number of observations | 459326 * | |
Number of reflections | 288614 * | |
<I/σ(I)> | 4.6 | |
Completeness [%] | 70.0 * | 51 * |
Redundancy | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 * | 293 | Jimenez-Clavero, M.A., (2003) Acta Cryst., D59, 541. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | virus solution | 5-10 (mg/ml) | |
2 | 1 | reservoir | ammonium sulfate | 1.2 (M) | |
3 | 1 | reservoir | sodium potassium phosphate | 0.1 (M) |