1MB2
Crystal Structure of Tryptophanyl-tRNA Synthetase Complexed with Tryptophan in an Open Conformation
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU RU200 |
| Temperature [K] | 298 |
| Detector technology | IMAGE PLATE |
| Detector | RIGAKU RAXIS II |
| Wavelength(s) | 1.5418 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 228.730, 92.240, 157.590 |
| Unit cell angles | 90.00, 132.71, 90.00 |
Refinement procedure
| Resolution | 15.000 * - 2.700 |
| Rwork | 0.220 |
| R-free | 0.24300 * |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1d2r |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.020 * |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | AMoRE |
| Refinement software | CNS (1.1) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 15.024 | 2.800 |
| High resolution limit [Å] | 2.700 * | 2.700 |
| Rmerge | 0.079 * | |
| Total number of observations | 120955 * | |
| Number of reflections | 55705 | |
| Completeness [%] | 83.1 | 50.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | MICRODIALYSIS | 6.6 | 42 * | potassium phosphate, l-tryptophan, pH 6.6, MICRODIALYSIS, temperature 310K |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | 1 | protein | 4 (mg/ml) | |
| 2 | 1 | 2 | potassium phosphate | 2 (M) | pH6.6 |
| 3 | 1 | 2 | Trp | 2 (mM) |






