1M7P
Plasmodium Falciparum Triosephosphate isomerase (PfTIM) compled to substrate analog glycerol-3-phosphate (G3P).
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 295 |
Detector technology | IMAGE PLATE |
Collection date | 1999-06-11 |
Detector | MARRESEARCH |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 54.124, 51.082, 89.549 |
Unit cell angles | 90.00, 91.39, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.400 |
Rwork | 0.179 |
R-free | 0.21900 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Dimer of Unbound PfTIM; PDB code 1YDV |
RMSD bond length | 0.008 |
RMSD bond angle | 1.486 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (0.4) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.490 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.115 * | 0.356 * |
Total number of observations | 98166 * | |
Number of reflections | 19337 | |
<I/σ(I)> | 12.3 | 4.1 |
Completeness [%] | 96.5 | 96.4 |
Redundancy | 5.1 | 4.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 * | 295 | 12% to 20% PEG 1450 in 100mm Sodium acetate, pH 4.5, VAPOR DIFFUSION, HANGING DROP at 295K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | PEG1450 | 8-24 (%) | |
2 | 1 | reservoir | sodium acetate | 100 (mM) | pH7.5 |
3 | 1 | drop | protein | 10 (mg/ml) |