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1M1P

P21 crystal structure of the tetraheme cytochrome c3 from Shewanella oneidensis MR1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID13
Synchrotron siteESRF
BeamlineID13
Temperature [K]100
Detector technologyCCD
Collection date2000-05-01
DetectorADSC QUANTUM 4
Wavelength(s)0.9
Spacegroup nameP 1 21 1
Unit cell lengths93.690, 34.005, 108.313
Unit cell angles90.00, 110.49, 90.00
Refinement procedure
Resolution15.000

*

- 1.550
R-factor0.1745
Rwork0.173
R-free0.22400

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Identical protein in P212121 spacegroup
RMSD bond length0.014
RMSD bond angle2.700

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]15.0001.590
High resolution limit [Å]1.5501.550
Rmerge0.064

*

Total number of observations197538

*

Number of reflections83876

*

Completeness [%]92.190
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP921

*

ammonium sulphate, bicine, pH 9, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirammonium sulfate3.5-3.8 (M)
21reservoirBicine0.1 (M)pH8.5-9.2
31dropprotein30 (mg/ml)

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PDB entries from 2025-12-03

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