1M1C
Structure of the L-A virus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2001-03-25 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.9648 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 407.000, 403.200, 572.000 |
Unit cell angles | 90.00, 90.46, 90.00 |
Refinement procedure
Resolution | 8.000 * - 3.400* |
Rwork | 0.266 |
R-free | 0.32400 * |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.014 * |
RMSD bond angle | 1.627 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | X-PLOR |
Refinement software | X-PLOR (3.851) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 89.500 * | 3.560 |
High resolution limit [Å] | 3.400 * | 3.400 * |
Rmerge | 0.104 | 0.433 * |
Total number of observations | 5151654 * | |
Number of reflections | 2105482 * | |
<I/σ(I)> | 8.3 | 1.5 |
Completeness [%] | 83.8 * | 70.8 * |
Redundancy | 2.4 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 22 * | Naitow, H., (2001) J. Struct. Biol., 135, 1. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | PEG8000 | 3.0-6.0 (%) | |
2 | 1 | reservoir | 1.0 (M) | ||
3 | 1 | reservoir | HEPES | 0.1 (M) | pH7.0 |
4 | 1 | drop | virus | 4-56 (mg/ml) |