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1M1C

Structure of the L-A virus

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Temperature [K]100
Detector technologyCCD
Collection date2001-03-25
DetectorADSC QUANTUM 4
Wavelength(s)0.9648
Spacegroup nameP 1 21 1
Unit cell lengths407.000, 403.200, 572.000
Unit cell angles90.00, 90.46, 90.00
Refinement procedure
Resolution8.000

*

- 3.400

*

Rwork0.266
R-free0.32400

*

Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.014

*

RMSD bond angle1.627

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]89.500

*

3.560
High resolution limit [Å]3.400

*

3.400

*

Rmerge0.1040.433

*

Total number of observations5151654

*

Number of reflections2105482

*

<I/σ(I)>8.31.5
Completeness [%]83.8

*

70.8

*

Redundancy2.4

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP722

*

Naitow, H., (2001) J. Struct. Biol., 135, 1.

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirPEG80003.0-6.0 (%)
21reservoir1.0 (M)
31reservoirHEPES0.1 (M)pH7.0
41dropvirus4-56 (mg/ml)

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PDB entries from 2024-05-15

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