1M08
Crystal structure of the unbound nuclease domain of ColE7
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU300 |
Temperature [K] | 120 |
Detector technology | IMAGE PLATE |
Collection date | 2001-08-08 |
Detector | RIGAKU RAXIS II |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 |
Unit cell lengths | 37.700, 39.200, 53.200 |
Unit cell angles | 96.80, 103.90, 91.40 |
Refinement procedure
Resolution | 50.000 * - 2.100 |
R-factor | 0.187 |
Rwork | 0.187 |
R-free | 0.24300 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7cei |
RMSD bond length | 0.017 * |
RMSD bond angle | 1.655 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.180 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.044 * | 0.173 * |
Total number of observations | 53594 * | |
Number of reflections | 16335 | |
<I/σ(I)> | 22.5 | 7 |
Completeness [%] | 95.0 | 92.7 |
Redundancy | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 * | 298 | sodium phosphate, Sodium Chloride, zinc chloride, ammonium acetate, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | nuclease ColE7 | 10 (mg/ml) | |
2 | 1 | drop | 5 (mM) | ||
3 | 1 | drop | ammonium acetate | 0.35 (M) | |
4 | 1 | drop | PEG4000 | 6.35 (%(w/v)) | |
5 | 1 | drop | Tris-HCl | 0.025 (M) | pH7.5 |
6 | 1 | reservoir | 10 (mM) | ||
7 | 1 | reservoir | ammonium acetate | 0.7 (M) | |
8 | 1 | reservoir | PEG4000 | 12.7 (%) |