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1LZI

Glycosyltransferase A + UDP + H antigen acceptor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X8C
Synchrotron siteNSLS
BeamlineX8C
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 4
Wavelength(s)1.15
Spacegroup nameC 2 2 21
Unit cell lengths52.810, 149.580, 79.970
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 1.350
R-factor0.182
Rwork0.179
R-free0.20000
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.020
RMSD bond angle2.700
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.410
High resolution limit [Å]1.3501.350
Rmerge0.050

*

0.224

*

Number of reflections66876
Completeness [%]95.5

*

69.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.518

*

ADA, manganese chloride, ammonium sulfate, MPD, glycerol, PEG 4000, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein6-8 (mg/ml)
101reservoirADA50 (mM)pH7.5
111reservoir10 (mM)
121reservoirammonium sulfate100 (mM)
131reservoirMPD5 (%(v/v))
141reservoirglycerol10 (%(v/v))
151reservoirPEG40008-10 (%(w/v))
21dropADA70 (mM)pH7.5
31dropsodium acetate50 (mM)pH4.6
41drop40 (mM)
51drop5-8 (mM)
61dropMPD2.5 (%(v/v))
71dropglycerol5 (%(v/v))
81dropPEG40002 (%(w/v))
91drop3-chloro-Hg-2-methoxy-propylurea0.3-0.5 (mM)

219869

PDB entries from 2024-05-15

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