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1LQW

Crystal Structure of S.aureus Peptide Deformylase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-3
Synchrotron siteESRF
BeamlineID14-3
Temperature [K]100
Detector technologyCCD
Collection date1999-12-09
DetectorMARRESEARCH
Wavelength(s)0.933
Spacegroup nameP 1 21 1
Unit cell lengths48.210, 42.190, 101.670
Unit cell angles90.00, 98.67, 90.00
Refinement procedure
Resolution100.000

*

- 1.870
R-factor0.231
Rwork0.231
R-free0.26500
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012
RMSD bond angle1.650
Data reduction softwareMOSFLM
Data scaling softwareCCP4 ((SCALA))
Phasing softwareAMoRE
Refinement softwareX-PLOR (98.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]26.0001.970
High resolution limit [Å]1.8701.870
Rmerge0.046

*

0.274

*

Number of reflections33121
<I/σ(I)>9.82.3
Completeness [%]98.595.4
Redundancy2.51.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.819

*

2.08M K2HPO4/NAH2PO4, pH 4.8, VAPOR DIFFUSION, HANGING DROP, temperature 299K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropsodium potassium phosphate1.04 (M)pH4.8
21dropprotein0.65 (mM)
31reservoirsodium potassium phosphate2.08 (M)pH4.8

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PDB entries from 2026-04-08

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