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1LDA

CRYSTAL STRUCTURE OF THE E. COLI GLYCEROL FACILITATOR (GLPF) WITHOUT SUBSTRATE GLYCEROL

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyCCD
Collection date2000-10-07
DetectorADSC QUANTUM
Spacegroup nameI 4 2 2
Unit cell lengths96.230, 96.230, 184.370
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 2.800
R-factor0.208

*

Rwork0.208
R-free0.24900
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)1fx8
RMSD bond length0.009
RMSD bond angle1.110
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.000
High resolution limit [Å]2.8002.800
Rmerge0.0900.296
Total number of observations51474

*

Number of reflections8698
<I/σ(I)>16.9
Completeness [%]78.672.41
Redundancy5.918
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1unknown

*

8.9

*

298GLPF AT 15-20 MG/ML, 28% (W/V) PEG 2000, 100 MM BICINE pH 9.5, 15 % (V/V) GLYCEROL, 35 MM, N-OCTYL-BETA-D-GLUCOSIDE, MGCL2, 5 MM DTT, pH 9.50, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
111protein15-20 (mg/ml)
212PEG200028 (%(w/v))
312bicine100 (mM)
412glycerol15 (%(v/v))
512n-octyl-beta-D-glucoside35 (mM)
612300 (mM)
712dithiothreitol5 (mM)

246031

PDB entries from 2025-12-10

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